getSpeciesFromSeqID: Species Identifier Converters

getSpeciesFromSeqIDR Documentation

Species Identifier Converters

Description

Helper functions to convert between species specific indentifiers

Usage

getSpeciesFromSeqID(seqID)
getOtherSpeciesFilePrefix(speciesID)

Arguments

seqID

character vector of SeqIDs

speciesID

character vector of SpeciesIDs

Value

For getSpeciesFromSeqID, a character vector of SpeciesID, of the same length as seqID. Invalid or not found SeqIDs will be NA. Only species defined by the current target are searched.

For getOtherSpeciesFilePrefix, a character vector of file prefixes. This works without regard for which species is current.


robertdouglasmorrison/DuffyTools documentation built on April 16, 2024, 6:31 a.m.