rankEquivIntensity: Quantile Normalize

Description Usage Arguments Value See Also

Description

Perform Quantile Normalization on the columns of a matrix

Usage

1
rankEquivIntensity(m, columnSets = list(all = 1:ncol(m)))

Arguments

m

numeric matrix of expression data, one row for each gene/oligo and one column for each sample

columnSets

list of vectors of column numbers, for doing the normalization by subsets of columns

Value

numeric matrix of the same size as m, with normalized columns.

See Also

duffyRMA, for RMA normalization.


robertdouglasmorrison/DuffyTools documentation built on Dec. 7, 2018, 8:02 a.m.