Description Usage Arguments Details Examples
This method overrides the default method plot
and handles the plots of dvhmatrix
class objects.
1 2 3 4 5 6 | ## S4 method for signature 'dvhmatrix,ANY'
plot(x, elements = NULL, enhance = NULL,
mean.dvh = FALSE, median.dvh = FALSE, mean.median.alone = FALSE,
el.color = "black", en.color = "red", mean.color = "blue",
median.color = "red", lwd = 1, C.I.dvh = FALSE, C.I.dvh.width = 0.95,
C.I.dvh.range = FALSE, n.boot = 2000, ...)
|
x |
The |
elements |
A vector containing the indeces of the DVHs to be plotted. |
enhance |
A vector containing the indeces of the DVHs curves to be enhanced in the plot by changing de default color. |
mean.dvh |
A |
median.dvh |
A |
mean.median.alone |
A |
el.color |
The color for plotting DVHs. The default value is |
en.color |
The color for plotting the enhanced DVHs. The default value is |
mean.color |
The color for the mean dvh plot. The default value is |
median.color |
The color for the median dvh plot. The default value is |
lwd |
The size of the lines in the plot. Default value is 1. |
C.I.dvh |
Plot the confidence interval of mean and/or median DVH(s) according the values in |
C.I.dvh.width |
The width of confidence interval of mean, median DVH(s) and overall dvh series. |
C.I.dvh.range |
Plot the confidence interval of the whole DVHs series according the value in |
n.boot |
The number of bootstrap repetitions for calculating the confidence interval of mean and median DVHs. |
... |
Other parameters to be passed to |
The dvh are stored in the slot dvh
of a dvhmatrix
class object. Of course it is possible for7
users to use these matrices for plotting the dvhs considering that the structure of the matrix is referenced
under dvhmatrix-class
. In order to simplify the plotting operations this method has been coded
allowing users to automatically obtain some useful features in the graphs, as the mean and median dvh curves,
and the confidence intervals for mean, median and overall dvh matrix. The confidence intervals of mean and
median are calculated by bootstrapping the whole dvhmatrix
and calculating a given number of mean and
median dvh values that finally are reduced by using a quantile function to create the final plot.
1 2 3 4 |
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