cis_trans: Get the percentage cis-contacts genome-wide or from a region
In robinweide/GENOVA: GENOVA: expore the Hi-C
cis_trans R Documentation
Get the percentage cis-contacts genome-wide or from a region
Description
Get the percentage cis-contacts genome-wide or from a region
Usage
cis_trans(exp, bed = NULL)
Arguments
exp
A contacts-objects or a list of them
bed
A bed-dataframe or a (named) list of them.
Value
A data.table with the sample, percentage and region.
Resolution recommendation
500kb-1Mb
robinweide/GENOVA documentation built on March 14, 2024, 11:16 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| cis_trans | R Documentation |
Get the percentage cis-contacts genome-wide or from a region
Description
Get the percentage cis-contacts genome-wide or from a region
Usage
cis_trans(exp, bed = NULL)
Arguments
exp |
A contacts-objects or a list of them |
bed |
A bed-dataframe or a (named) list of them. |
Value
A data.table with the sample, percentage and region.
Resolution recommendation
500kb-1Mb
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.