tad2border: tad2border
In robinweide/RHWlib: Simple functions to make life... simpler.
Description
Usage
Arguments
Value
Description
TAD-bed to border-Granges
Usage
1
tad2border(df, chr = T, keepMeta = T, whichBorders = 8, padding = 10000)
Arguments
df
A dataframe with bed-like three columns
chr
Prepend chr to chromosome-names?
whichBorders
Generate 5', 3' of both borders? [5,3,8]
padding
Padding left and right of a border in bp.
Value
A genomicRanges-object of borders
robinweide/RHWlib documentation built on May 7, 2019, 8:03 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
TAD-bed to border-Granges
Usage
1 | tad2border(df, chr = T, keepMeta = T, whichBorders = 8, padding = 10000)
|
Arguments
df |
A dataframe with bed-like three columns |
chr |
Prepend chr to chromosome-names? |
whichBorders |
Generate 5', 3' of both borders? [5,3,8] |
padding |
Padding left and right of a border in bp. |
Value
A genomicRanges-object of borders
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.