Description Usage Arguments Details Value
Create a pedigree object
1 |
lineNames |
The names of the genetic lines |
mother |
The index of the maternal line |
father |
The index of the paternal line |
selfing |
Should the number of generations of selfing be taken from the pedigree ( |
warnImproperFunnels |
Should a warning be generated in subsequent computations using this pedigree, if there are lines which do not contain all founding lines as ancestors? |
This function creates a pedigree object from parts. All lines are assumed to have an index, starting at 1 for the first line. Values at index of the various inputs 1 all relate to the first line, values at index 2 all relate to the second line, etc.
Input lineNames
assigns a name to every line. Input mother
gives the index of a mother line, where a value of 0 indicates that a line is a founder of the population (and therefore inbred). Input father
gives the index of a father line, where a value of 0 indicates that a line is a founder of the population (and therefore inbred). Input selfing
must be "finite"
or "infinite"
. A value of infinite means that the number of generations of selfing for this pedigree will be assumed to be infinite. A value of "finite"
means that the number of generations of selfing will be computed from the pedigree, for every line.
An object of class pedigree
representing the inputs.
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