dplot_compare_profiles: Compare two response profiles

In ropensci/DoOR.functions: Integrating Heterogeneous Odorant Response Data into a Common Response Model: A DoOR to the Complete Olfactome

Compare two response profiles

Description

Orderdered bar plots for two studies, allowing for an easy comparison of the two studies / response profiles'.

Usage

dplot_compare_profiles(x, y, by.x, by.y, tag = "Name", base_size = 12)

Arguments

x	the input data frame the first response profile will be taken from
y	the input data frame the second response profile will be taken from (x will be taken if y is missing)
by.x	character string, specifying a column in x
by.y	character string, specifying a column in y
tag	character, the chemical identifier that will be used as odorant label.
base_size	numeric, the base font size for the ggplot2 plot

Author(s)

Daniel Münch <[e-mail]>

Examples

# load data
library(DoOR.data)
library(DoOR.functions)
data(Or22a)
data(door_response_range)
data(door_response_matrix)

# compare the Hallem and the Pelz data set for Or22a
dplot_compare_profiles(x = Or22a, y = Or22a,
                         by.x = "Hallem.2006.EN",
                         by.y = "Pelz.2006.AntEC50")

# comparedata from two different sensory neurons and add odorant labels 
dplot_compare_profiles(x = cbind(door_response_matrix, InChIKey =
rownames(door_response_matrix)), y = cbind(door_response_matrix, InChIKey =
rownames(door_response_matrix)), by.x = "Or22a", by.y = "Or10a")

ropensci/DoOR.functions documentation built on Feb. 22, 2024, 9:44 a.m.