aggregateReplicates: Aggregate Replicates
In roryk/bcbioSinglecell: Single-Cell RNA-Seq Utilities
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Aggregate Replicates
Usage
1
2
## S4 method for signature 'bcbioSingleCell'
aggregateReplicates(object)
Arguments
object
Object.
Value
SingleCellExperiment.
Author(s)
Michael Steinbaugh, Rory Kirchner
See Also
Other Data Functions: cell2sample,
fetchGeneData,
mapCellsToSamples,
metricsPerSample, sampleData,
selectSamples,
subsetPerSample, topBarcodes
Examples
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# bcbioSingleCell ====
object <- indrops_small
sampleNames(object)
# Define groupings factor as`aggregate` column in `colData()`
glimpse(object$aggregate)
x <- aggregateReplicates(object)
show(x)
sampleNames(x)
roryk/bcbioSinglecell documentation built on May 27, 2019, 10:44 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Aggregate Replicates
Usage
1 2 | ## S4 method for signature 'bcbioSingleCell'
aggregateReplicates(object)
|
Arguments
object |
Object. |
Value
SingleCellExperiment.
Author(s)
Michael Steinbaugh, Rory Kirchner
See Also
Other Data Functions: cell2sample,
fetchGeneData,
mapCellsToSamples,
metricsPerSample, sampleData,
selectSamples,
subsetPerSample, topBarcodes
Examples
1 2 3 4 5 6 7 8 9 10 | # bcbioSingleCell ====
object <- indrops_small
sampleNames(object)
# Define groupings factor as`aggregate` column in `colData()`
glimpse(object$aggregate)
x <- aggregateReplicates(object)
show(x)
sampleNames(x)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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