aggregateReplicates: Aggregate Replicates

Description Usage Arguments Value Author(s) See Also Examples

Description

Aggregate Replicates

Usage

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## S4 method for signature 'bcbioSingleCell'
aggregateReplicates(object)

Arguments

object

Object.

Value

SingleCellExperiment.

Author(s)

Michael Steinbaugh, Rory Kirchner

See Also

Other Data Functions: cell2sample, fetchGeneData, mapCellsToSamples, metricsPerSample, sampleData, selectSamples, subsetPerSample, topBarcodes

Examples

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# bcbioSingleCell ====
object <- indrops_small
sampleNames(object)

# Define groupings factor as`aggregate` column in `colData()`
glimpse(object$aggregate)

x <- aggregateReplicates(object)
show(x)
sampleNames(x)

roryk/bcbioSinglecell documentation built on May 27, 2019, 10:44 p.m.