MixtureSummary-class: A plottable summary of a mixture model

In rscharpf/MixModelViz: Plot mixture models with applications to copy number or batch effects

Description

An object summarizing the observed mixture model and theoretical models as plottable data.frames

Slots

observed

data.frame of observed values, with batch and component metadata. Suitable for histogram plotting. Must have the following columns: "batch" (bactor), "component" (factor), "x.val" (numeric).

theoretical

data.frame of predicted densities plotted over the range of observed values, with batch and component metadata. Suitable for line plotting. Must have the following columns: "batch" (factor), "component" (factor), "x" (numeric), "y" (numeric).

nBins

integer value for reccomended number of bins when plotting over the exact range of '.Data@observed$x.val' . '.Data@predicted$y' has been scaled to bin width, e.g. 'diff(range(.Data@observed$x.val))/nBins' .

rscharpf/MixModelViz documentation built on May 29, 2019, 8:55 a.m.