summarizeObserved-method: Create a plottable summary of the observed mixture model.

In rscharpf/MixModelViz: Plot mixture models with applications to copy number or batch effects

Description

This function retrieves the observed values, predicted component, and batch identifiers from a 'MixtureModel' object. Suitable for plotting counts with a histogram.

Usage

summarizeObserved(model)

## S4 method for signature 'MixtureModel'
summarizeObserved(model)

## S4 method for signature 'SingleBatchModel'
summarizeObserved(model)

## S4 method for signature 'SingleBatchCopyNumber'
summarizeObserved(model)

## S4 method for signature 'MultiBatchCopyNumber'
summarizeObserved(model)

## S4 method for signature 'MultiBatchCopyNumberPooled'
summarizeObserved(model)

Arguments

model

A 'MixtureModel' object

Value

A data.frame containing the varibles described by 'ObservedNames(model)' for each observed object in the model.

rscharpf/MixModelViz documentation built on May 29, 2019, 8:55 a.m.