summarize-method: Summarize a MixtureModel into a set of data.frames that can...

In rscharpf/MixModelViz: Plot mixture models with applications to copy number or batch effects

Description

This function returns a list of two data.frames (observed and predicted) that can be plotted over each other. The observed values can be plotted as a histogram when split by 'nBins(MixtureSumamry.obj)'. The theoretical distribution has been scaled to be plotted over the histogram when plotted as described.

Usage

summarize(model)

## S4 method for signature 'MixtureModel'
summarize(model)

## S4 method for signature 'SingleBatchCopyNumber'
summarize(model)

## S4 method for signature 'MultiBatchCopyNumber'
summarize(model)

## S4 method for signature 'MultiBatchCopyNumberPooled'
summarize(model)

Arguments

model

a MixtureModel-derived object

Value

A MixtureSummary object.

rscharpf/MixModelViz documentation built on May 29, 2019, 8:55 a.m.