API for ruqianl/comapr
Crossover analysis and genetic map construction

Global functions
.aggregation_fun_log	Source code
.change_missing	Man page Source code
.check_mapping_fun	Source code
.filterCOsExtra	Man page Source code
.get_af_data	Source code
.get_af_track_and_co	Source code
.get_barcodes	Source code
.get_cell_idx	Source code
.get_cells_mm	Source code
.get_count_matrix	Source code
.get_group_diff	Source code
.get_segInfo_chrs	Source code
.get_snp_pos	Source code
.h_map	Source code
.k_map	Source code
.label_gt	Man page Source code
.nameFeatures	Source code
.rb_to_dist	Source code
.setGenDistToRowRanges	Source code
bootstrapDist	Man page Source code
calGeneticDist	Man page
calGeneticDist,GRanges,missing,ANY,ANY,character-method	Man page
calGeneticDist,GRanges,missing,ANY,ANY,missing-method	Man page
calGeneticDist,GRanges,numeric,ANY,ANY,character-method	Man page
calGeneticDist,GRanges,numeric,ANY,ANY,missing-method	Man page
calGeneticDist,RangedSummarizedExperiment,missing,ANY,ANY,charac	Man page
calGeneticDist,RangedSummarizedExperiment,missing,ANY,ANY,missin	Man page
calGeneticDist,RangedSummarizedExperiment,numeric,ANY,ANY,charac	Man page
calGeneticDist,RangedSummarizedExperiment,numeric,ANY,ANY,missin	Man page
calGenetic_dist	Source code
cal_bin_dist	Source code
cal_marker_dist	Source code
coCount	Man page
comapr	Man page
combineHapState	Man page Source code
correctGT	Man page Source code
countBinState	Man page Source code
countCOs	Man page
countCOs,GRanges-method	Man page
countCOs,RangedSummarizedExperiment-method	Man page
countCOs_gr	Source code
countGT	Man page Source code
fill_fail	Man page Source code
filterGT	Man page Source code
filterGT,GRanges,numeric,numeric-method	Man page
filterGT,matrix,numeric,numeric-method	Man page
findDupSamples	Man page Source code
getAFTracks	Man page Source code
getCellAFTrack	Man page Source code Source code
getCellCORange	Man page Source code
getCellDPTrack	Man page Source code
getDistortedMarkers	Man page Source code
getMeanDPTrack	Man page Source code
getSNPDensityTrack	Man page Source code
parents_geno	Man page
perCellChrQC	Man page Source code
perSegChrQC	Man page Source code
permuteDist	Man page Source code
plotCount	Man page
plotCount,GRanges,logical,character-method	Man page
plotCount,GRanges,logical,missing-method	Man page
plotCount,GRanges,missing,character-method	Man page
plotCount,GRanges,missing,missing-method	Man page
plotCount,RangedSummarizedExperiment,logical,character-method	Man page
plotCount,RangedSummarizedExperiment,logical,missing-method	Man page
plotCount,RangedSummarizedExperiment,missing,character-method	Man page
plotCount,RangedSummarizedExperiment,missing,missing-method	Man page
plotGTFreq	Man page Source code
plotGeneticDist	Man page Source code
plotMissingGT	Source code
plotWholeGenome	Man page Source code
plot_count	Source code
readColMM	Man page Source code
readHapState	Man page Source code
snp_geno	Man page
snp_geno_gr	Man page
twoSamples	Man page