averagePairWiseSimilarityH: Compute average pairwise similarity between Q matrices.
In sa-lee/starmie: Population Structure Model Inference and Visualisation
Description
Usage
Arguments
Details
Examples
View source: R/averagePairWiseSimilarityH.R
Description
Compute average pairwise similarity between Q matrices.
Usage
1
averagePairWiseSimilarityH(Q_list)
Arguments
Q_list
A list of of Q matrices.
Details
Implementation of the pairwise similarity metric as
defined in Jakobsson, M. and Rosenberg, N. A., 2007.
Examples
1
2
3
4
# Read in Structure files
multiple_runs_k10 <- exampleStructure("mcmc_diagnostics")
Q_list <- lapply(multiple_runs_k10, getQ)
avgQ <- averagePairWiseSimilarityH(Q_list)
sa-lee/starmie documentation built on May 28, 2019, 11 a.m.
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Description Usage Arguments Details Examples
View source: R/averagePairWiseSimilarityH.R
Description
Compute average pairwise similarity between Q matrices.
Usage
1 | averagePairWiseSimilarityH(Q_list)
|
Arguments
Q_list |
A list of of Q matrices. |
Details
Implementation of the pairwise similarity metric as defined in Jakobsson, M. and Rosenberg, N. A., 2007.
Examples
1 2 3 4 | # Read in Structure files
multiple_runs_k10 <- exampleStructure("mcmc_diagnostics")
Q_list <- lapply(multiple_runs_k10, getQ)
avgQ <- averagePairWiseSimilarityH(Q_list)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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