prepare_metab_inputs: add metabolic compartment and metab__ prefix to metabolite...
In saezlab/COSMOS: COSMOS (Causal Oriented Search of Multi-Omic Space)
View source: R/prepare_metab_inputs.R
prepare_metab_inputs R Documentation
add metabolic compartment and metab__ prefix to metabolite IDs
Description
This function adds metabolic compartments to the metabolic identifiers provided by the user.
Usage
prepare_metab_inputs(metab_input, compartment_codes)
Arguments
metab_input
a named vector with matebolic statistics as inputs and metabolite identifiers as names
compartment_codes
a character vector, the desired compartment codes to be added. Possible values are "r", "c", "e", "x", "m", "l", "n" and "g"
Value
a named vector with the compartment code and prefixed added to the names
saezlab/COSMOS documentation built on Sept. 17, 2023, 1:22 p.m.
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View source: R/prepare_metab_inputs.R
| prepare_metab_inputs | R Documentation |
add metabolic compartment and metab__ prefix to metabolite IDs
Description
This function adds metabolic compartments to the metabolic identifiers provided by the user.
Usage
prepare_metab_inputs(metab_input, compartment_codes)
Arguments
metab_input |
a named vector with matebolic statistics as inputs and metabolite identifiers as names |
compartment_codes |
a character vector, the desired compartment codes to be added. Possible values are "r", "c", "e", "x", "m", "l", "n" and "g" |
Value
a named vector with the compartment code and prefixed added to the names
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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