toy_signaling_input: Toy Signaling Input

In saezlab/COSMOS: COSMOS (Causal Oriented Search of Multi-Omic Space)

Toy Signaling Input

Description

This signaling data are a subset of the footprint-based signaling activity estimates of transcription factors of the 786-O cell line from the NCI60 dataset.

Usage

data(toy_signaling_input)

Format

An object of class “data.frame” containing the normalised enrichment scores (NES) of 2 signaling proteins, which are named with their respective gene Entrez ID matching the toy network.

Source

Subset of: https://github.com/saezlab/COSMOS_MSB/blob/main/data/signaling_input_COSMOS.csv

References

Dugourd, A., Kuppe, C. and Sciacovelli, M. et. al. (2021) Molecular Systems Biology. 17, e9730.

Examples

data(toy_signaling_input)

saezlab/COSMOS documentation built on Sept. 17, 2023, 1:22 p.m.