CNOdata: Get data from a CellNOpt data repository

In saezlab/CellNOptR: Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data

Get data from a CellNOpt data repository

Description

This function fetch a file from the URL provided (default is http://www.ebi.ac.uk/~cokelaer/cellnopt/data/_downloads) and save it into a temporary file.

You will need Rcurl package to use this function.

Usage

CNOdata(filename, verbose=FALSE, url=NULL)

Arguments

filename	a valid filename that can be found in the url
verbose	FALSE by default, it prints the path of the temporary file where data has been copied.
url	You can overwrite the default URL (http://www.ebi.ac.uk/~cokelaer/cellnopt/data/_downloads) with this argument.

Value

the path of the temporary file where data has been copied.

Author(s)

T. Cokelaer

Examples

## Not run: readSIF(CNOdata("PKN-ToyMMB.sif"))

saezlab/CellNOptR documentation built on April 16, 2024, 5:21 a.m.