cutModel: Cut a model structure according to a bitstring

In saezlab/CellNOptR: Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data

Cut a model structure according to a bitstring

Description

This function is for developers only.

Usage

cutModel(model, bString)

Arguments

model	the model object to cut.
bString	the bitString to be used to cut the model object.

Value

cutModel

the new model object

Note

added in version 1.3.16

Author(s)

T. Cokelaer

Examples

   
    data(ToyModel,package="CellNOptR")
    
    bString = rep(1,length(ToyModel$reacID))
    # remove some reactions by setting them to 0. 
    bString[c(2,5,6)] <- 0
    
    prepModel = cutModel(model = ToyModel, bString = bString )
 
    

saezlab/CellNOptR documentation built on April 16, 2024, 5:21 a.m.