invokeCPLEX: Solving the ILP problem with CPLEX.

In saezlab/CellNOptR: Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data

Solving the ILP problem with CPLEX.

Description

This function takes as an input the file name where we write the ILP formulation together with CPLEX parameters and then solves the ILP problem.

Usage

invokeCPLEX(inputFileName, 
                        outputFileName, 
                        mipGap=mipGap, 
                        relGap = relGap, 
                        timelimit=timelimit, 
                        cplexPath = cplexPath, 
                        numSolutions = numSolutions, 
                        limitPop = limitPop, 
                        poolIntensity = poolIntensity, 
                        poolReplace = poolReplace)

Arguments

inputFileName	the file name where the cplex ilp problem is stored
outputFileName	the file name where to store the cplex result
mipGap	the mipgap
relGap	the relGap
timelimit	the timelimit
cplexPath	the cplex solver path
numSolutions	the number of desired solutions
limitPop	the limitPop
poolIntensity	the poolIntensity
poolReplace	the poolReplace

Author(s)

E Gjerga, H Koch

saezlab/CellNOptR documentation built on April 16, 2024, 5:21 a.m.