ScoreSpecifics-class: S4 Class used to generate aggregate/consesus scores for the...

In saezlab/liana: LIANA: a LIgand-receptor ANalysis frAmework

S4 Class used to generate aggregate/consesus scores for the methods.

Description

S4 Class used to generate aggregate/consesus scores for the methods.

Fields

method_name

name of the method (e.g. cellchat)

method_score

The interaction score provided by the method (typically the score that reflects the specificity of interaction)

descending_order

whether the score should be interpreted in descending order (i.e. highest score for an interaction is most likely)

score_fun

name of the function to call to generate the results

columns

columns required to generate the score

saezlab/liana documentation built on Nov. 8, 2023, 11:53 a.m.