rank_method | R Documentation |
Helper function to rank each method
rank_method(liana_res, method_name, mode = "specificity")
liana_res |
liana_results for a single method |
method_name |
name of the method |
mode |
ranking to be carried out. Accepted modes are 'specificity' and 'magnitude'. The first is meant to reflect the specificity of interactions across all cell types, while the latter typically reflects how highly expressed is a given interaction. |
this function makes use of liana's 'liana:::.score_specs' and 'liana:::.score_housekeep' functions.
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