Top_Genes_Factor: Extract top loading genes for LIGER factor

In samuel-marsh/scCustomize: Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing

Extract top loading genes for LIGER factor

Description

Extract vector to the top loading genes for specified LIGER iNMF factor

Usage

Top_Genes_Factor(liger_object, liger_factor, num_genes = 10)

Arguments

liger_object	LIGER object name.
liger_factor	LIGER factor number to pull genes from.
num_genes	number of top loading genes to return as vector.

Value

A LIGER Object

Examples

## Not run: 
top_genes_factor10 <- Top_Genes_Factor(liger_object = object, num_genes = 10)

## End(Not run)

samuel-marsh/scCustomize documentation built on Dec. 20, 2024, 7:41 a.m.