ieg_gene_list: Immediate Early Gene (IEG) gene lists
In samuel-marsh/scCustomize: Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing
ieg_gene_list R Documentation
Immediate Early Gene (IEG) gene lists
Description
Gene symbols for immediate early genes
Usage
ieg_gene_list
Format
A list of seven vectors
- Mus_musculus_IEGs
Gene symbols for IEGs from source publication (see below)
- Homo_sapiens_IEGs
Human gene symbols for homologous genes from mouse gene list
Source
Mouse gene list is from: SI Table 4 from \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.neuron.2017.09.026")}. Human
gene list was compiled by first creating homologous gene list using biomaRt and then adding some manually curated
homologs according to HGNC. See data-raw directory for scripts used to create gene list.
samuel-marsh/scCustomize documentation built on Dec. 20, 2024, 7:41 a.m.
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| ieg_gene_list | R Documentation |
Immediate Early Gene (IEG) gene lists
Description
Gene symbols for immediate early genes
Usage
ieg_gene_list
Format
A list of seven vectors
- Mus_musculus_IEGs
Gene symbols for IEGs from source publication (see below)
- Homo_sapiens_IEGs
Human gene symbols for homologous genes from mouse gene list
Source
Mouse gene list is from: SI Table 4 from \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.neuron.2017.09.026")}. Human gene list was compiled by first creating homologous gene list using biomaRt and then adding some manually curated homologs according to HGNC. See data-raw directory for scripts used to create gene list.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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