constructDESeqDataset: Construct DESeq2 dataset
In sanger-pathogens/deago: DEAGO: RNASeq differential expression analysis and GO term enrichment reporter
Description
Usage
Arguments
Value
Description
A DESeqDataSet is a subclass of RangedSummarizedExperiment, used to store the input values, intermediate calculations and results of an analysis of differential expression.
Usage
1
constructDESeqDataset(countdata, coldata)
Arguments
countdata
Name of object containing count data
coldata
input matrix for DESeq2 analysis
Value
Returns a DESeqDataSet object
sanger-pathogens/deago documentation built on May 28, 2019, 8:42 a.m.
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Description Usage Arguments Value
Description
A DESeqDataSet is a subclass of RangedSummarizedExperiment, used to store the input values, intermediate calculations and results of an analysis of differential expression.
Usage
1 | constructDESeqDataset(countdata, coldata)
|
Arguments
countdata |
Name of object containing count data |
coldata |
input matrix for DESeq2 analysis |
Value
Returns a DESeqDataSet object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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