prepareGoData: Prepare GO data
In sanger-pathogens/deago: DEAGO: RNASeq differential expression analysis and GO term enrichment reporter
Description
Prepare GO terms for TopGO analysis
Usage
1
prepareGOdata(dds, contrast, go_level, gene_level = "all")
Arguments
dds
DESeq object
contrast
DESeqResults object
go_level
BP or MF
gene_level
all, up or down [all]
sanger-pathogens/deago documentation built on May 28, 2019, 8:42 a.m.
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Description
Prepare GO terms for TopGO analysis
Usage
1 | prepareGOdata(dds, contrast, go_level, gene_level = "all")
|
Arguments
dds |
DESeq object |
contrast |
DESeqResults object |
go_level |
BP or MF |
gene_level |
all, up or down [all] |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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