plotContrastMA: Contrast MA plot
In sanger-pathogens/deago: DEAGO: RNASeq differential expression analysis and GO term enrichment reporter
Description
Usage
Arguments
Details
Description
plotContrastMA generates a contrast MA plot.
Usage
1
2
plotContrastMA(contrast, resultsDir, alpha = 0.05, lfc = 2,
geneSymbols = NULL, geneLabels = FALSE)
Arguments
contrast
A DESeqResults object
resultsDir
Name of timestamped results directory
alpha
FDR
lfc
log2FoldChange
geneSymbols
gene symbols
geneLabels
description
Details
Add some details here.
sanger-pathogens/deago documentation built on May 28, 2019, 8:42 a.m.
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Description Usage Arguments Details
Description
plotContrastMA generates a contrast MA plot.
Usage
1 2 | plotContrastMA(contrast, resultsDir, alpha = 0.05, lfc = 2,
geneSymbols = NULL, geneLabels = FALSE)
|
Arguments
contrast |
A DESeqResults object |
resultsDir |
Name of timestamped results directory |
alpha |
FDR |
lfc |
log2FoldChange |
geneSymbols |
gene symbols |
geneLabels |
description |
Details
Add some details here.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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