plotVolcano: Volcano plot
In sanger-pathogens/deago: DEAGO: RNASeq differential expression analysis and GO term enrichment reporter

Generates volcano plot for each contrast

1 2	plotVolcano(contrast, resultsDir, alpha = 0.05, lfc = 2, geneSymbols = NULL, geneLabels = FALSE)

`contrast`	DESeq2 contrast
`resultsDir`	Name of timestamped results directory
`alpha`	FDR
`lfc`	log2FoldChange
`geneSymbols`	gene symbols
`geneLabels`	description

sanger-pathogens/deago documentation built on May 28, 2019, 8:42 a.m.

sanger-pathogens/deago index

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Description