writeGMT: Write gene sets to a GMT file
In sansomlab/gsfisher: Geneset Fisher
writeGMT R Documentation
Write gene sets to a GMT file
Description
Write gene sets to a GMT file
Usage
writeGMT(geneset, outfile)
Arguments
geneset
A list of gene sets (e.g. from readGMT).
outfile
Path to the output file.
Author(s)
Steve Sansom
See Also
readGMT
Examples
gmtFile <- system.file(package = "gsfisher", "extdata", "kegg_hs.gmt")
ann_gmt <- readGMT(gmtFile)
outfile <- tempfile()
writeGMT(ann_gmt, outfile)
sansomlab/gsfisher documentation built on July 7, 2022, 4:21 a.m.
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| writeGMT | R Documentation |
Write gene sets to a GMT file
Description
Write gene sets to a GMT file
Usage
writeGMT(geneset, outfile)
Arguments
geneset |
A list of gene sets (e.g. from |
outfile |
Path to the output file. |
Author(s)
Steve Sansom
See Also
readGMT
Examples
gmtFile <- system.file(package = "gsfisher", "extdata", "kegg_hs.gmt") ann_gmt <- readGMT(gmtFile) outfile <- tempfile() writeGMT(ann_gmt, outfile)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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