dLogPosteriorWrapper: A wrapper for 'dLogPosterior'

In sbfnk/fitR: Tool box for fitting dynamic infectious disease models to time series

A wrapper for dLogPosterior

Description

A wrapper for dLogPosterior that returns a function that can be used as a target for mcmcMh

Usage

dLogPosteriorWrapper(fitmodel, initState, data, margLogLike, ...)

Arguments

fitmodel	a fitmodel object
initState	named numeric vector. Initial values of the state variables. Names should match fitmodel$stateNames.
data	data frame. Observation times and observed data. The time column must be named "time" and the observation column must be named "obs".
margLogLike	R-function to compute the marginal log-likelihood of theta.
...	further arguments to be passed to margLogLike

Value

a R-function with one argument called theta.

sbfnk/fitR documentation built on July 18, 2023, 3:28 p.m.