API for sbfnk/fitR
Tool box for fitting dynamic infectious disease models to time series.

Global functions
ABCLogPosterior Man page Source code
FluTdC1971 Man page
SEIT2L_deter Man page
SEIT2L_pomp Man page
SEIT2L_pomp_r Man page
SEIT2L_stoch Man page
SEIT4L_deter Man page
SEIT4L_pomp Man page
SEIT4L_pomp_r Man page
SEIT4L_stoch Man page
SEITL_deter Man page
SEITL_distanceOscillation Man page Source code
SEITL_pomp Man page
SEITL_pomp_r Man page
SEITL_stoch Man page
SIR Man page
SIR_exp Man page
SIR_reporting Man page
SIR_stoch Man page
burnAndThin Man page Source code
computeDIC Man page Source code
computeDistanceABC Man page Source code
dTrajObs Man page Source code
distanceOscillation Man page Source code
export2Tracer Man page Source code
fitmodel Man page Source code
logPosterior Man page Source code
logPosteriorWrapper Man page Source code
margLogLikeSto Man page Source code
mcmcMH Man page Source code
measles Man page
particleFilter Man page Source code
plotESSBurn Man page Source code
plotFit Man page Source code
plotHPDregion2D Man page Source code
plotPosteriorDensity Man page Source code
plotPosteriorFit Man page Source code
plotSMC Man page Source code
plotTrace Man page Source code
plotTraj Man page Source code
printNamedVector Man page Source code
rTrajObs Man page Source code
simulateFinalStateAtExtinction Man page Source code
simulateModelReplicates Man page Source code
simulateModelStochastic Man page Source code
testFitmodel Man page Source code
updateCovmat Man page Source code
sbfnk/fitR documentation built on Aug. 12, 2017, 7:47 a.m.