mcmcSeitlInfoPriorTheta2: Markov-chain Monte Carlo (MCMC) outputs of a fit of the SEITL...

mcmcSeitlInfoPriorTheta2R Documentation

Markov-chain Monte Carlo (MCMC) outputs of a fit of the SEITL model to the influenza outbreak on Tristan da Cunha (long run)

Description

A dataset containing the MCMC outputs of a fit of the 'seitlDeter' model to the 'fluTdc1971' data set with informative priors (50000 iterations). This differs from the 'mcmcSeitlTheta2' dataset in the choice of priors and from the 'mcmcSeitlInfoPriorTheta1' dataset in the choice of initial parameter set theta.

Format

A list with three elements describing the MCMC outputs

Details

  • trace data frame containing the MCMC trace

  • acceptanceRate a single value denoting the acceptance rate

  • covmatEmprical the covariance matrix of parameter samples


sbfnk/fitR documentation built on July 18, 2023, 3:28 p.m.