scientific-computing-solutions/sibyl
Extrapolate Parametric Survival Curves

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180
Source code
42
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39
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scientific-computing-solutions/sibyl: Extrapolate Parametric Survival Curves
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API

API for scientific-computing-solutions/sibyl
Extrapolate Parametric Survival Curves

Global functions
.sibylKMplot Source code
AvCurvePlotData-class Man page
ColumnDef Man page Source code
ColumnDef-class Man page
SemiParametricModel-class Man page
Sibyl Man page
Sibyl-package Man page
SurvivalData Man page Source code
SurvivalData-class Man page
SurvivalModel-class Man page
addModel Man page
addModel,SurvivalModel-method Man page
addModel,SurvivalModel-methods Man page
addSplineOptionsToName Source code
akaike_ic Source code
bayes_ic Source code
calcInterpolatedKMLifeTable Source code
calcKMLifeTable Source code
calcLifeTable Source code
calcLifeTableNoCovariates Source code
calcModelRmst Man page Man page
calcModelRmst,SurvivalModel-method Man page
calcModelTables Source code
calcParametricLifeTable Source code
calcRmst Man page Man page
calcRmst,SemiParametricModel-method Man page
categoricalMaturityTypeSpecific Source code
categoricalTypeSpecific Source code
checkColumnNameValid Source code
checkEventsPerArm Source code
checkValidDataPerArm Source code
convertMissingFactorsToOwnLevel Source code
convertSummariseToFlexTable Source code
convertToLogical Source code
convertToNumeric Source code
covariatesMaturitySummary Source code
covariatesSummary Source code
coxSnellRes Man page Man page
coxSnellRes,SemiParametricModel-method Man page
coxphLogRankTest Man page Man page
coxphLogRankTest,SemiParametricModel-method Man page
createAvCurvePlotData Man page
createAvCurvePlotData,SurvivalModel-method Man page
createAvCurvePlotData,SurvivalModel-methods Man page
createCovariateSummarySubTable Source code
createIcTable Man page
createIcTable,SurvivalModel-method Man page
createIcTable,SurvivalModel-methods Man page
createLifeTable Man page
createLifeTable,SurvivalModel-method Man page
createLifeTable,SurvivalModel-methods Man page
diagnosticPlot Source code
endPointsSummary Source code
estimateHazard Source code
evaluateRules Source code
extractCovariateOutput Source code
extractCumHazData Source code
extractEndPointOutput Source code
extractForSpline Source code
extractKnots Source code
extractScale Source code
extractSubgroup Source code
extractSubgroupTable Source code
fitModelToData Source code
fitModels Man page
fitModels,SurvivalData-method Man page
fitModels,SurvivalData-methods Man page
fitSemiParametric Man page Man page
fitSemiParametric,SurvivalData-method Man page
fitSplines Man page
fitSplines,SurvivalModel-method Man page
fitSplines,SurvivalModel-methods Man page
flexsurvSummariser Source code
getArmNames Source code
getBestModel Man page Source code
getCholeskyDecomp Man page
getCholeskyDecomp,SurvivalModel-method Man page
getCholeskyDecomp,SurvivalModel-methods Man page
getDefaultPackage Source code
getDisplayRowNames Source code
getDistColours Source code
getDistributionDisplayNames Man page Source code
getEndpointUnits Man page
getEndpointUnits,AvCurvePlotData-method Man page
getEndpointUnits,AvCurvePlotData-methods Man page
getEndpointUnits,SemiParametricModel-method Man page
getEndpointUnits,SemiParametricModel-methods Man page
getEndpointUnits,SurvivalData-method Man page
getEndpointUnits,SurvivalData-methods Man page
getEndpointUnits,SurvivalModel-method Man page
getEndpointUnits,SurvivalModel-methods Man page
getHeaders Source code
getLastPoint Source code
getMaxEndpointTime Man page Source code
getMaxEndpointTime,SemiParametricModel-method Man page
getModelFitter Source code
getParamSummariser Source code
getSplineDistColours Source code
getSplineKnotLocations Man page Source code
getTypeSpecificValues Source code
getZeroTimes Man page Source code
groupDataForFitting Source code
hasCovariates Source code
internalFitModels Source code
internalGetICTable Source code
isSingleArm Man page Man page Man page Man page Man page
isSingleArm,AvCurvePlotData-method Man page
isSingleArm,SemiParametricModel-method Man page
isSingleArm,SurvivalData-method Man page
isSingleArm,SurvivalModel-method Man page
isSplineFit Source code
kmPlot Source code
kmPlotWrapper Man page Source code
kmsummary Source code
lines.survfit Source code
listColumnDefSlot Source code
loglogisticSummariser Source code
maxObservedTime Man page Source code
minOfMaxObserved Man page Source code
numberOfRowsNeeded Source code
numericTypeSpecific Source code
plot Man page
plot,AvCurvePlotData,missing-method Man page
plot,SemiParametricModel,missing-method Man page
points.survfit Source code
removeModel Man page
removeModel,SurvivalModel-method Man page
removeModel,SurvivalModel-methods Man page
removeNonPositiveTimes Source code
removeOneModel Source code
schoenfeldResiduals Man page Man page
schoenfeldResiduals,SemiParametricModel-method Man page
se Source code
show Man page Man page
show,ColumnDef-method Man page
show,SurvivalData-method Man page
sibylData Man page
specificEndpointRules Man page Source code
subgroupsSummary Source code
summariseCoeffs Man page
summariseCoeffs,SurvivalModel-method Man page
summary Man page Man page
summary,SemiParametricModel-method Man page
summary,SurvivalData-method Man page
survivalFormula Source code
typeSpecificConstructor Source code
validateArm Source code
validateCovariates Source code
validateCreateAvCurvePlotDataArgs Source code
validateEndPointCols Source code
validateEndPointVals Source code
validateSubgroups Source code
validateSubjects Source code
vcov Man page
vcov,SurvivalModel-method Man page
vcov,SurvivalModel-methods Man page
weibullSummariser Source code
scientific-computing-solutions/sibyl documentation built on May 21, 2019, 8:40 a.m.

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