write_stan_files_no_profile: Write copies of the .stan files of a Stan model and its...

In seabbs/epinowcast: Flexible Hierarchical Nowcasting

Write copies of the .stan files of a Stan model and its #include files with all profiling statements removed.

Description

Write copies of the .stan files of a Stan model and its #include files with all profiling statements removed.

Usage

write_stan_files_no_profile(
  stan_file,
  include_paths = NULL,
  target_dir = epinowcast::enw_get_cache()
)

Arguments

stan_file	The path to a .stan file containing a Stan program.
include_paths	Paths to directories where Stan should look for files specified in #include directives in the Stan program.
target_dir	The path to a directory in which the manipulated .stan files without profiling statements should be stored. To avoid overriding of the original .stan files, this should be different from the directory of the original model and the include_paths.

Value

A list containing the path to the .stan file without profiling statements and the include_paths for the included .stan files without profiling statements

See Also

Functions used to help convert models into the format required for stan enw_formula_as_data_list(), enw_get_cache(), enw_model(), enw_pathfinder(), enw_priors_as_data_list(), enw_replace_priors(), enw_sample(), enw_set_cache(), enw_stan_to_r(), enw_unset_cache(), remove_profiling()

seabbs/epinowcast documentation built on Feb. 3, 2025, 9:56 p.m.