get_n_alive_group: Get number alive by location

In seroanalytics/serosolver: Inference Framework for Serological Data

Get number alive by location

Description

Given the titre_dat data frame with entries for location, calculates the number that are alive (alive to be infected, that is) for each time in times by location

Usage

get_n_alive_group(titre_dat, times, melt_dat = FALSE)

Arguments

titre_dat	the data frame of titre data. See example_titre_dat
times	the vector of times to calculate number alive for
melt_dat	if TRUE, returns a melted data frame. Returns a wide matrix otherwise.

Value

a matrix giving the number alive in each time point in each location

See Also

Other get_summary: get_DOBs(), get_n_alive()

Examples

data(example_titre_dat)
data(example_antigenic_map)
times <- unique(example_antigenic_map$inf_times)
get_n_alive_group(example_titre_dat, times)

seroanalytics/serosolver documentation built on July 19, 2023, 5:10 a.m.