melt_antigenic_coords: Create useable antigenic map
In seroanalytics/serosolver: Inference Framework for Serological Data
melt_antigenic_coords R Documentation
Create useable antigenic map
Description
Creates an antigenic map from an input data frame that can be used to calculate cross reactivity. This will end up being an NxN matrix, where there are N strains circulating.
Usage
melt_antigenic_coords(anti.map.in)
Arguments
anti.map.in
can either be a 1D antigenic line to calculate distance from, or a two dimensional matrix with x and y coordinates on an antigenic map
Value
the euclidean antigenic distance between each pair of viruses in anti.map.in
seroanalytics/serosolver documentation built on Dec. 14, 2024, 5:33 a.m.
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| melt_antigenic_coords | R Documentation |
Create useable antigenic map
Description
Creates an antigenic map from an input data frame that can be used to calculate cross reactivity. This will end up being an NxN matrix, where there are N strains circulating.
Usage
melt_antigenic_coords(anti.map.in)
Arguments
anti.map.in |
can either be a 1D antigenic line to calculate distance from, or a two dimensional matrix with x and y coordinates on an antigenic map |
Value
the euclidean antigenic distance between each pair of viruses in anti.map.in
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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