pad_inf_chain: Pad infection history chain
In seroanalytics/serosolver: Inference Framework for Serological Data
pad_inf_chain R Documentation
Pad infection history chain
Description
Given that the MCMC sampler only stores present infections (ie. there are no entries for 0s from the infection history matrix), for some summaries we need to add these 0s back in to avoid bias.
Usage
pad_inf_chain(inf_chain)
Arguments
inf_chain
the data table with infection history samples from run_MCMC
Value
the same inf_chain that was passed in, but with 0s for missing i/j/sampno combinations
seroanalytics/serosolver documentation built on July 19, 2023, 5:10 a.m.
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| pad_inf_chain | R Documentation |
Pad infection history chain
Description
Given that the MCMC sampler only stores present infections (ie. there are no entries for 0s from the infection history matrix), for some summaries we need to add these 0s back in to avoid bias.
Usage
pad_inf_chain(inf_chain)
Arguments
inf_chain |
the data table with infection history samples from |
Value
the same inf_chain that was passed in, but with 0s for missing i/j/sampno combinations
seroanalytics/serosolver documentation built on July 19, 2023, 5:10 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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