shashidhar22/LymphoSeq2: Analyze high-throughput sequencing of T and B cell receptors

This R package analyzes high-throughput sequencing of T and B cell receptor complementarity determining region 3 (CDR3) sequences generated by Adaptive Biotechnologies' ImmunoSEQ assay. Its input comes from tab-separated value (.tsv) files exported from the ImmunoSEQ analyzer.

Getting started

Package details

Bioconductor views Alignment MultipleSequenceAlignment Sequencing Software TargetedResequencing Technology msa phyloseq vegan
Maintainer
LicenseArtistic-2.0
Version1.0.0
URL https://github.com/elulu3/LymphoSeq2 https://elulu3.github.io/LymphoSeq2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("shashidhar22/LymphoSeq2")
shashidhar22/LymphoSeq2 documentation built on March 28, 2022, 1:12 a.m.