getLOESSfit: calculates LOESS fit between RT of two runs

Description Usage Arguments Value

Description

This function takes in run-pairs, names of test peptides, span paprameter for LOESS function, output of OpenSWATH which include estimated retention time of peptides.

Usage

1
getLOESSfit(run_pair, peptides, oswOutput, spanvalue = 0.1)

Arguments

run_pair

A vector of length 2 with run names

peptides

Test peptides' names

oswOutput

list of list (OpenSWATH output)

spanvalue

A numeric Spanvalue for LOESS fit. For targeted proteomics 0.1 could be used.

Value

An object of class "loess"


shubham1637/DIAlignR documentation built on May 8, 2019, 8:12 a.m.