create_contamination_note: Create contamination note from eager results for poseidon
In sidora-tools/eager2poseidon: Automatically fill in Missing Metadata in a Janno File
create_contamination_note R Documentation
Create contamination note from eager results for poseidon
Description
Create contamination note for the sample, ignoring duplicated library entries.
Usage
create_contamination_note(lib_ids, nr_snps, snp_cutoff = 100)
Arguments
lib_ids
character. The names of the libraries the contamination estimates correspond to.
nr_snps
character. The number of SNPs for the contamination estimate.
snp_cutoff
integer. The minimum number of SNPs, below which nuclear contamination results should be ignored.
Value
character. An appropriate Contamination_Note
sidora-tools/eager2poseidon documentation built on May 12, 2023, 11:58 p.m.
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| create_contamination_note | R Documentation |
Create contamination note from eager results for poseidon
Description
Create contamination note for the sample, ignoring duplicated library entries.
Usage
create_contamination_note(lib_ids, nr_snps, snp_cutoff = 100)
Arguments
lib_ids |
character. The names of the libraries the contamination estimates correspond to. |
nr_snps |
character. The number of SNPs for the contamination estimate. |
snp_cutoff |
integer. The minimum number of SNPs, below which nuclear contamination results should be ignored. |
Value
character. An appropriate Contamination_Note
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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