Files in singjc/mstools

OpenSWATH Mass Spectrometry Data Exploration

R/Mode.R R/RcppExports.R R/XICMasterPlotFcn.R R/catOSWruns.R R/drawNakedPeptide.R R/filterOSWdb.R R/filterPQPdb.R R/filterSQMASSdb.R R/getChromatogramDataPoints.R R/getFDREstimatePerformance.R R/getIdentificationsBarplot.R R/getModificationPosition.R R/getOSWData.R R/getOSWReportsVisualization.R R/getPepLibData.R R/getPrecisionRecall.R R/getQuantificationMatrixPlot.R R/getQuantificationplot.R R/getROC.R R/getRunID.R R/getTransitionScores.R R/getUnimodMapping.R R/getXIC.R R/getmzPntrs.R R/getsqMassPntrs.R R/log_setup.R R/mstools-package.R R/pairwise_comparison.R R/pairwise_comparison_vectorized.R R/python_dependencies_installer.R R/unimod_mapping-data.R R/utils.R README.md man/Mode.Rd man/Score_IPF_Present.Rd man/XICMasterPlotFcn_.Rd man/as_character_null.Rd man/catOSWruns_.Rd man/check_sqlite_table.Rd man/codenameTounimod.Rd man/d_score_hist.Rd man/filterOSWdb.Rd man/filterPQPdb.Rd man/filterSQMASSdb.Rd man/generateUniModMapping_.Rd man/getChromatogramDataPoints_.Rd man/getFDREstimatePerformance.Rd man/getIdentificationsBarplot.Rd man/getListObj.Rd man/getModificationPosition_.Rd man/getOSWData_.Rd man/getPepLibData_.Rd man/getPrecisionRecall.Rd man/getQuantificationplot.Rd man/getROC.Rd man/getRunID_.Rd man/getTransitionScores_.Rd man/getXIC.Rd man/getmzPntrs.Rd man/getsqMassPntrs.Rd man/isListObj.Rd man/listTostring.Rd man/log_setup.Rd man/osw_reports_visualization.Rd man/pairwise_comparison.Rd man/pairwise_comparison_vectorized.Rd man/unimodTocodename.Rd man/unimodTouniisoid.Rd man/unimod_mapping.Rd vignettes/mstools_data_exploration_and_visualization.Rmd