inferRegulations: Infer regulatory relationships
In sqjin/scAI: integrative analysis of single-cell transcriptomic and epigenomic profiles
Description
Infer regulatory relationships
Usage
1
2
inferRegulations(object, gene.use, candinate_loci, cutoff_H = 0.5,
cutoff = 0.1, thresh_corr = 0.2)
Arguments
object
scAI object
gene.use
genes to be inferred
candinate_loci
cadinate loci
cutoff_H
threshold of coefficient values
cutoff
the difference of correlation to be considered as significant
thresh_corr
threshold of correlation coefficient
sqjin/scAI documentation built on Nov. 19, 2020, 4:04 p.m.
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Description
Infer regulatory relationships
Usage
1 2 | inferRegulations(object, gene.use, candinate_loci, cutoff_H = 0.5,
cutoff = 0.1, thresh_corr = 0.2)
|
Arguments
object |
scAI object |
gene.use |
genes to be inferred |
candinate_loci |
cadinate loci |
cutoff_H |
threshold of coefficient values |
cutoff |
the difference of correlation to be considered as significant |
thresh_corr |
threshold of correlation coefficient |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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