API for steinbaugh/pfgsea
Parameterized Fast GSEA

Global functions
.filterResults Source code
.headtail Source code
.leadingEdge Source code
FGSEAList-class Man page
RankedList Man page
RankedList,DESeqAnalysis-method Man page
RankedList,FGSEAList-method Man page
RankedList,matrix-method Man page
RankedList-class Man page
collectionNames Man page
collectionNames,FGSEAList-method Man page
collectionNames<- Man page
collectionNames<-,FGSEAList,character-method Man page
combine Man page
combine,FGSEAList,FGSEAList-method Man page
contrastNames Man page
contrastNames,FGSEAList-method Man page
contrastNames<- Man page
contrastNames<-,FGSEAList,character-method Man page
convertToHuman Man page
convertToHuman,DESeqAnalysis-method Man page
defunct Man page
deprecated Man page
enrichedGeneSets Man page
enrichedGeneSets,FGSEAList-method Man page
export Man page
export,FGSEAList-method Man page
gsea Man page
params Man page
pfgsea Man page Source code
pfgseaTestsURL Man page
plotCounts Man page
plotCounts,FGSEAList-method Man page
plotEnrichedGeneSets Man page
plotEnrichedGeneSets,FGSEAList-method Man page
plotEnrichedUpset Man page
plotEnrichedUpset,FGSEAList-method Man page
plotEnrichment Man page Source code
plotGSEATable Man page Source code
plotHeatmap Man page
plotHeatmap,FGSEAList-method Man page
show Man page
show,FGSEAList-method Man page
topTables Man page
topTables,FGSEAList-method Man page
updateObject Man page
updateObject,FGSEAList-method Man page
steinbaugh/pfgsea documentation built on Nov. 22, 2019, 6:12 a.m.