Man pages for steinbaugh/pfgsea
Parameterized Fast GSEA

collectionNamesGene set collection names
combineCombining or merging different Bioconductor data structures
contrastNamesContrast names
convertToHumanConvert data set to use human orthologs
defunctDefunct functions
deprecatedDeprecated functions
enrichedGeneSetsEnriched pathways
FGSEAList-classFast GSEA list
gseaFGSEAList example data
pfgseaParameterized fast gene set enrichment analysis (GSEA)
pfgseaTestsURLpfgsea test data URL
plotCountsPlot counts
plotEnrichedGeneSetsPlot enriched gene sets
plotEnrichedUpsetUpSet plot of directional enriched pathway intersections...
RankedListRanked list of genes
RankedList-classRanked list of genes
showShow an object
topTablesTop tables
updateObjectUpdate an object to its current class definition
steinbaugh/pfgsea documentation built on Nov. 22, 2019, 6:12 a.m.