results: Results

In steinbaugh/pfgsea: Acid Genomics GSEA

Results

Description

Results

Usage

results(object, ...)

## S4 method for signature 'FgseaList'
results(object, contrast, collection)

Arguments

object	Object.
contrast	character(1). Contrast name.
collection	character(1). Gene set collection name. Typically refers to h (hallmark), c1-c7 collections from MSigDb. Can obtain using collectionNames() on FgseaList object.
...	Additional arguments.

Value

Varies, depending on the method.

Note

Updated 2022-04-27.

Examples

data(fgsea)

## FgseaList ====
object <- fgsea
contrast <- contrastNames(object)[[1L]]
collection <- collectionNames(object)[[1L]]
results(
    object = fgsea,
    contrast = contrast,
    collection = collection
)

steinbaugh/pfgsea documentation built on Oct. 17, 2023, 11:24 a.m.