Files in steinbaugh/pfgsea
Parameterized Fast GSEA

.Rbuildignore
.gitignore
.lintr
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/AllClasses.R R/AllGenerators.R R/AllGenerics.R R/collectionNames-methods.R R/combine-methods.R R/contrastNames-methods.R R/convertToHuman-methods.R R/data.R R/deprecated.R R/enrichedGeneSets-methods.R R/export-methods.R R/globals.R R/imports.R R/internal.R R/package.R R/params.R R/pfgsea.R R/plotCounts-methods.R R/plotEnrichedGeneSets-methods.R R/plotEnrichedUpset-methods.R R/plotHeatmap-methods.R R/show-methods.R R/topTables-methods.R R/updateObject-methods.R README.md
_pkgdown.yml
appveyor.yml
data-raw/gsea.R
data/gsea.rda
docs/404.html
docs/CNAME
docs/LICENSE-text.html
docs/articles/index.html
docs/articles/pfgsea.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/extra.css
docs/index.html
docs/link.svg
docs/news/index.html
docs/news/news-0.0.html
docs/news/news-0.1.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/FGSEAList-class.html
docs/reference/RankedList-class.html
docs/reference/RankedList.html
docs/reference/collectionNames.html
docs/reference/combine.html
docs/reference/contrastNames.html
docs/reference/convertToHuman.html
docs/reference/defunct.html
docs/reference/deprecated.html
docs/reference/enrichedGeneSets.html
docs/reference/export.html
docs/reference/gsea.html
docs/reference/index.html
docs/reference/params.html
docs/reference/pfgsea-package.html
docs/reference/pfgsea.html
docs/reference/pfgseaTestsURL.html
docs/reference/plotCounts.html
docs/reference/plotEnrichedGeneSets-1.png
docs/reference/plotEnrichedGeneSets-2.png
docs/reference/plotEnrichedGeneSets.html
docs/reference/plotEnrichedUpset-1.png
docs/reference/plotEnrichedUpset.html
docs/reference/plotHeatmap.html
docs/reference/show.html
docs/reference/topTables.html
docs/reference/updateObject.html
inst/extdata/msigdb/msigdb_v6.2_GMTs/h.all.v6.2.symbols.gmt
inst/rmarkdown/templates/pfgsea/skeleton/skeleton.Rmd
inst/rmarkdown/templates/pfgsea/template.yaml
inst/scripts/render.R man/FGSEAList-class.Rd man/RankedList-class.Rd man/RankedList.Rd man/collectionNames.Rd man/combine.Rd man/contrastNames.Rd man/convertToHuman.Rd man/defunct.Rd man/deprecated.Rd man/enrichedGeneSets.Rd man/export.Rd man/gsea.Rd man/params.Rd man/pfgsea-package.Rd man/pfgsea.Rd man/pfgseaTestsURL.Rd man/plotCounts.Rd man/plotEnrichedGeneSets.Rd man/plotEnrichedUpset.Rd man/plotHeatmap.Rd man/show.Rd man/topTables.Rd man/updateObject.Rd msigdb.R
pfgsea.Rproj
pkgdown/extra.css
tests/testthat.R tests/testthat/helper-cache.R tests/testthat/helper-globals.R tests/testthat/test-RankedList.R tests/testthat/test-collectionNames.R tests/testthat/test-combine.R tests/testthat/test-convertToHuman.R tests/testthat/test-enrichedGeneSets.R tests/testthat/test-export.R tests/testthat/test-pfgsea.R tests/testthat/test-plotEnrichedGeneSets.R tests/testthat/test-plotEnrichedUpset.R tests/testthat/test-show.R tests/testthat/test-topTables.R vignettes/pfgsea.Rmd
steinbaugh/pfgsea documentation built on Nov. 22, 2019, 6:12 a.m.