API for stevencarlislewalker/lme4ord
Generalized Linear Mixed Models with Flexible (Co)Variance Structures
| Global functions | |
|---|---|
| .bind | Man page |
| Ops.strucMatrix | Man page |
| VarCorr.strucGlmer | Man page |
| as.data.frame.strucMatrix | Man page |
| as.matrix.strucMatrix | Man page |
| as.matrix.strucMatrixChol | Man page |
| as.strucMatrix | Man page |
| as.strucMatrix.dCHMsimpl | Man page |
| as.strucMatrix.dist | Man page |
| as.strucMatrix.dsparseMatrix | Man page |
| as.strucMatrix.factor | Man page |
| as.strucMatrix.matrix | Man page |
| as.strucMatrix.strucMatrix | Man page |
| assignWith | Man page |
| binaryLangOp | Man page |
| bind | Man page |
| biplot.factAnal | Man page |
| chol,strucMatrix-method | Man page |
| chol,strucMatrixCompSymm-method | Man page |
| chol,strucMatrixOneOffDiag-method | Man page |
| compressStrucGlmer | Man page |
| cooccur | Man page |
| countInRange | Man page |
| countUnique | Man page |
| covExpDecay | Man page |
| covar | Man page |
| covar.strucGlmer | Man page |
| covar.strucParseFormula | Man page |
| covarPerTerm | Man page |
| crossprod,strucMatrix,missing-method | Man page |
| crossprod,strucMatrix,strucMatrix-method | Man page |
| denseDiagInds | Man page |
| denseLowerInds | Man page |
| denseUpperInds | Man page |
| deviance.strucGlmer | Man page |
| df.residual.strucGlmer | Man page |
| diag,strucMatrix-method | Man page |
| diag<-,strucMatrix-method | Man page |
| dim.strucMatrix | Man page |
| edgeTipIndicator | Man page |
| edgeTipIndicator.default | Man page |
| edgeTipIndicator.hclust | Man page |
| edgeTipIndicator.matrix | Man page |
| edgeTipIndicator.mst | Man page |
| edgeTipIndicator.phylo | Man page |
| expDecay | Man page |
| factAnal | Man page |
| factors | Man page |
| family.strucGlmer | Man page |
| family.strucParseFormula | Man page |
| familySimFun | Man page |
| familySimFun.GammaFamily | Man page |
| familySimFun.binomialFamily | Man page |
| familySimFun.character | Man page |
| familySimFun.family | Man page |
| familySimFun.function | Man page |
| familySimFun.gaussianFamily | Man page |
| familySimFun.poissonFamily | Man page |
| findEdgesFromPath | Man page |
| findPathFromNode | Man page |
| findReTrmClasses | Man page |
| fitted.strucGlmer | Man page |
| fixef.strucGlmer | Man page |
| fixef.strucParseFormula | Man page |
| fixefModMat | Man page |
| fixefModMat.strucGlmer | Man page |
| fixefModMat.strucParseFormula | Man page |
| flattenIntVec | Man page |
| flexvar | Man page |
| formula.strucGlmer | Man page |
| getAddArgs | Man page |
| getCorStruct | Man page |
| getInit | Man page |
| getInit.default | Man page |
| getInit.function | Man page |
| getInit.reTrmStruct | Man page |
| getInit.strucMatrix | Man page |
| getInit.strucParseFormula | Man page |
| getModMatAndGrpFac | Man page |
| getOffset | Man page |
| getParInds | Man page |
| getParInds.strucGlmer | Man page |
| getParInds.strucParseFormula | Man page |
| getParTypes | Man page |
| getReTrm | Man page |
| getRepPattern | Man page |
| getStrucGlmerPar | Man page |
| identity | Man page |
| image.strucMatrix | Man page |
| ind2point | Man page |
| isREML.strucGlmer | Man page |
| kr | Man page |
| kron | Man page |
| kronecker,strucMatrix,strucMatrix-method | Man page |
| langOps | Man page |
| laplace | Man page |
| laplace.default | Man page |
| laplace.glmerMod | Man page |
| laplace.strucGlmer | Man page |
| listLangOp | Man page |
| listOfSubscriptingCallsWithListOfIndices | Man page |
| listTranspose | Man page |
| lme4 | Man page |
| lme4ord | Man page |
| lme4ord-package | Man page |
| loads | Man page |
| loads.default | Man page |
| loads.strucGlmer | Man page |
| loads.strucParseFormula | Man page |
| loadsPerTerm | Man page |
| logLik.strucGlmer | Man page |
| mkBinaryLangOp | Man page |
| mkCholCompSymmTrans | Man page |
| mkCholOneOffDiagTrans | Man page |
| mkConstVarCholTrans | Man page |
| mkCorMatCholTrans | Man page |
| mkExpCholTrans | Man page |
| mkFlexDiagTrans | Man page |
| mkGenCholInPlaceTrans | Man page |
| mkGeneralGlmerDevfun | Man page |
| mkIdentityTrans | Man page |
| mkListTrans | Man page |
| mkMultiVarExpTrans | Man page |
| mkOuterTrans | Man page |
| mkParInds | Man page |
| mkPenLpNorm | Man page |
| mkPenPareto | Man page |
| mkPenaltyFun | Man page |
| mkReTrmStructs | Man page |
| mkSparseTrans | Man page |
| mkStrucGlmer | Man page |
| mkTrans | Man page |
| mkVarExpTrans | Man page |
| mkVarFixedTrans | Man page |
| mkVarIdentTrans | Man page |
| mkVarPowerTrans | Man page |
| model.matrix.strucGlmer | Man page |
| model.matrix.strucParseFormula | Man page |
| nChoose2Inv | Man page |
| nRePerTrm | Man page |
| nlmeCorStruct | Man page |
| noSpecials | Man page |
| nobs.strucGlmer | Man page |
| nobs.strucParseFormula | Man page |
| obslev | Man page |
| orthProcrustesRotMat | Man page |
| packReTrm | Man page |
| package-lme4ord | Man page |
| parLength | Man page |
| parLength.strucGlmer | Man page |
| parLength.strucMatrix | Man page |
| parLength.strucParseFormula | Man page |
| parPerTerm | Man page |
| pars | Man page |
| pars.glmerMod | Man page |
| pars.strucGlmer | Man page |
| pars.strucParseFormula | Man page |
| phyloEdge | Man page |
| plot.strucMatrix | Man page |
| point2ind | Man page |
| print.reTrmStruct | Man page |
| print.strucGlmer | Man page |
| print.strucMatrix | Man page |
| print.strucParseFormula | Man page |
| print.summary.strucGlmer | Man page |
| printReTrm | Man page |
| printReTrm.default | Man page |
| printReTrm.factAnal | Man page |
| printReTrm.nlmeCorStruct | Man page |
| rStrucMatrix | Man page |
| ranef.reTrmStruct | Man page |
| ranef.strucGlmer | Man page |
| ranefModMat | Man page |
| ranefModMat.reTrmStruct | Man page |
| ranefModMat.strucGlmer | Man page |
| ranefModMat.strucParseFormula | Man page |
| reForm | Man page |
| reIndsPerTrm | Man page |
| reTrmStruct | Man page |
| reTrmStruct-class | Man page |
| relCovFact | Man page |
| relCovFact.reTrmStruct | Man page |
| relCovFact.strucGlmer | Man page |
| relCovFact.strucParseFormula | Man page |
| reorderPhylo | Man page |
| rep.strucMatrix | Man page |
| resetTransConst | Man page |
| residuals.strucGlmer | Man page |
| response | Man page |
| response.strucGlmer | Man page |
| response.strucParseFormula | Man page |
| scalarMult | Man page |
| scores.factAnal | Man page |
| sem | Man page |
| setInit | Man page |
| setInit.default | Man page |
| setInit.function | Man page |
| setInit.reTrmStruct | Man page |
| setInit.strucMatrix | Man page |
| setInit.strucParseFormula | Man page |
| setLowerDefault | Man page |
| setReTrm | Man page |
| setReTrm.cooccur | Man page |
| setReTrm.default | Man page |
| setReTrm.expDecay | Man page |
| setReTrm.factAnal | Man page |
| setReTrm.flexvar | Man page |
| setReTrm.identity | Man page |
| setReTrm.lme4 | Man page |
| setReTrm.nlmeCorStruct | Man page |
| setReTrm.obslev | Man page |
| setReTrm.phyloEdge | Man page |
| setReTrm.sem | Man page |
| setReTrm.varExp | Man page |
| setReTrm.varIdent | Man page |
| setUpperDefault | Man page |
| showSkeleton | Man page |
| sigma.nlmeCorStruct | Man page |
| sigma.reTrmStruct | Man page |
| sigma.strucGlmer | Man page |
| sigma.strucParseFormula | Man page |
| simAddArgs | Man page |
| simAddArgs.default | Man page |
| simAddArgs.phyloEdge | Man page |
| simAddArgsList | Man page |
| simReTrm | Man page |
| simStrucParsedForm | Man page |
| simplifyFacList | Man page |
| simplifyStrucMatrix | Man page |
| simulate.strucGlmer | Man page |
| simulate.strucParseFormula | Man page |
| sort.strucMatrix | Man page |
| sortedBind | Man page |
| splitForm | Man page |
| stanCov | Man page |
| standardSort | Man page |
| strucDims | Man page |
| strucGlmer | Man page |
| strucGlmer-class | Man page |
| strucGlmer.default | Man page |
| strucGlmer.formula | Man page |
| strucGlmer.function | Man page |
| strucGlmer.strucParseFormula | Man page |
| strucMatrix | Man page |
| strucMatrix-class | Man page |
| strucMatrix2dgCMatrix | Man page |
| strucMatrix2dgTMatrix | Man page |
| strucMatrix2dtCMatrix | Man page |
| strucMatrix2dtTMatrix | Man page |
| strucMatrix2gCsparseMatrix | Man page |
| strucMatrix2gTsparseMatrix | Man page |
| strucMatrix2sparseMatrix | Man page |
| strucMatrixBlank | Man page |
| strucMatrixCol | Man page |
| strucMatrixCompSymm | Man page |
| strucMatrixConstVarChol | Man page |
| strucMatrixCorFactor | Man page |
| strucMatrixCorMatChol | Man page |
| strucMatrixDiag | Man page |
| strucMatrixExpChol | Man page |
| strucMatrixFull | Man page |
| strucMatrixGenFullTri | Man page |
| strucMatrixIdent | Man page |
| strucMatrixInd | Man page |
| strucMatrixOneOffDiag | Man page |
| strucMatrixOnes | Man page |
| strucMatrixRowSubset | Man page |
| strucMatrixSymm | Man page |
| strucMatrixTri | Man page |
| strucMatrixVarWithCovariate | Man page |
| strucMkDevfun | Man page |
| strucOpt | Man page |
| strucParseFormula | Man page |
| subset.strucMatrix | Man page |
| summary.strucGlmer | Man page |
| t.strucMatrix | Man page |
| tcrossprod,strucMatrix,missing-method | Man page |
| tcrossprod,strucMatrix,strucMatrix-method | Man page |
| tipNodeRelationship | Man page |
| triInds | Man page |
| unaryLangOp | Man page |
| update.flexvar | Man page |
| update.nlmeCorStruct | Man page |
| update.reTrmStruct | Man page |
| update.strucGlmer | Man page |
| update.strucMatrix | Man page |
| update.strucParseFormula | Man page |
| varExp | Man page |
| varIdent | Man page |
| vcov.strucGlmer | Man page |
| weights.strucGlmer | Man page |
