API for stevencarlislewalker/lme4ord
Generalized Linear Mixed Models with Flexible (Co)Variance Structures

Global functions
.bind Man page
Ops.strucMatrix Man page Source code
VarCorr.factAnal Source code
VarCorr.reTrmStruct Source code
VarCorr.strucGlmer Man page Source code
anySpecial Source code
as.data.frame.strucMatrix Man page Source code
as.matrix.strucMatrix Man page Source code
as.matrix.strucMatrixChol Man page Source code
as.strucMatrix Man page Source code
as.strucMatrix.dCHMsimpl Man page Source code
as.strucMatrix.dist Man page Source code
as.strucMatrix.dsparseMatrix Man page Source code
as.strucMatrix.factor Man page Source code
as.strucMatrix.matrix Man page Source code
as.strucMatrix.strucMatrix Man page Source code
assignWith Man page Source code
binaryLangOp Man page Source code
bind Man page Source code Source code
biplot.factAnal Man page Source code
calc.vcov.hess Source code
cat.f Source code
chol,strucMatrix-method Man page
chol,strucMatrixCompSymm-method Man page
chol,strucMatrixOneOffDiag-method Man page
compressStrucGlmer Man page Source code
cooccur Man page
countInRange Man page Source code
countUnique Man page Source code
covExpDecay Man page Source code
covar Man page Source code
covar.strucGlmer Man page Source code
covar.strucParseFormula Man page Source code
covarPerTerm Man page Source code
crossprod,strucMatrix,missing-method Man page
crossprod,strucMatrix,strucMatrix-method Man page
denseDiagInds Man page Source code
denseLowerInds Man page Source code
denseUpperInds Man page Source code
deriv12 Source code
devCritFun Source code
deviance.strucGlmer Man page Source code
df.residual.strucGlmer Man page Source code
diag,strucMatrix-method Man page
diag<-,strucMatrix-method Man page
dim.strucMatrix Man page Source code
edgeTipIndicator Man page Source code
edgeTipIndicator.default Man page Source code
edgeTipIndicator.hclust Man page Source code
edgeTipIndicator.matrix Man page Source code
edgeTipIndicator.mst Man page Source code
edgeTipIndicator.phylo Man page Source code
expDecay Man page
factAnal Man page
factors Man page Source code
family.strucGlmer Man page Source code
family.strucParseFormula Man page Source code
familySimFun Man page Source code
familySimFun.GammaFamily Man page Source code
familySimFun.binomialFamily Man page Source code
familySimFun.character Man page Source code
familySimFun.family Man page Source code
familySimFun.function Man page Source code
familySimFun.gaussianFamily Man page Source code
familySimFun.poissonFamily Man page Source code
famlink Source code
findEdgesFromPath Man page Source code
findPathFromNode Man page Source code
findReTrmClasses Man page Source code
fitted.strucGlmer Man page Source code
fixFamily Source code
fixef.strucGlmer Man page Source code
fixef.strucParseFormula Man page Source code
fixefModMat Man page Source code
fixefModMat.strucGlmer Man page Source code
fixefModMat.strucParseFormula Man page Source code
flattenIntVec Man page Source code
flexvar Man page
formatStrucVC Source code
formatVC Source code
formula.strucGlmer Man page Source code
gamma.shape.merMod Source code
getAddArgs Man page Source code
getCorStruct Man page Source code
getInit Man page Source code
getInit.default Man page Source code
getInit.function Man page Source code
getInit.reTrmStruct Man page Source code
getInit.strucMatrix Man page Source code
getInit.strucParseFormula Man page Source code
getLlikAIC Source code
getModMatAndGrpFac Man page Source code
getOffset Man page Source code
getParInds Man page Source code
getParInds.strucGlmer Man page Source code
getParInds.strucParseFormula Man page Source code
getParTypes Man page Source code
getReTrm Man page Source code
getRepPattern Man page Source code
getStrucGlmerPar Man page Source code
getStrucLlikAIC Source code
identity Man page
image.strucMatrix Man page Source code
ind2point Man page Source code
indsForClass Source code
initializeResp Source code
isAnyArgSpecial Source code
isREML.strucGlmer Man page Source code
isSpecial Source code
kr Man page Source code
kron Man page Source code
kronecker,strucMatrix,strucMatrix-method Man page
langOps Man page
laplace Man page Source code
laplace.default Man page Source code
laplace.glmerMod Man page Source code
laplace.strucGlmer Man page Source code
listLangOp Man page Source code
listOfSubscriptingCallsWithListOfIndices Man page Source code
listTranspose Man page Source code
lme4 Man page
lme4ord Man page
lme4ord-package Man page
loads Man page Source code
loads.default Man page Source code
loads.strucGlmer Man page Source code
loads.strucParseFormula Man page Source code
loadsPerTerm Man page Source code
logLik.strucGlmer Man page Source code
makeFac Source code
mapplyInvList Source code
mkBinaryLangOp Man page Source code
mkCholCompSymmTrans Man page Source code
mkCholOneOffDiagTrans Man page Source code
mkConstVarCholTrans Man page Source code
mkCorMatCholTrans Man page Source code
mkExpCholTrans Man page Source code
mkFlexDiagTrans Man page Source code
mkGenCholInPlaceTrans Man page Source code
mkGeneralGlmerDevfun Man page Source code
mkGeneralLmerDevfun Source code
mkIdentityTrans Man page Source code
mkListTrans Man page Source code
mkMultiVarExpTrans Man page Source code
mkOuterTrans Man page Source code
mkParInds Man page Source code
mkPenLpNorm Man page Source code
mkPenPareto Man page Source code
mkPenaltyFun Man page Source code
mkReTrmStructs Man page Source code
mkSparseTrans Man page Source code
mkStrucGlmer Man page Source code
mkTrans Man page Source code
mkVarExpTrans Man page Source code
mkVarFixedTrans Man page Source code
mkVarIdentTrans Man page Source code
mkVarPowerTrans Man page Source code
model.matrix.strucGlmer Man page Source code
model.matrix.strucParseFormula Man page Source code
nChoose2Inv Man page Source code
nRePerTrm Man page Source code
namedList Source code
nlmeCorStruct Man page
noSpecials Man page Source code
noSpecials_ Source code
nobs.strucGlmer Man page Source code
nobs.strucParseFormula Man page Source code
obslev Man page
orthProcrustesRotMat Man page Source code
packReTrm Man page Source code
package-lme4ord Man page
parLength Man page Source code
parLength.strucGlmer Man page Source code
parLength.strucMatrix Man page Source code
parLength.strucParseFormula Man page Source code
parPerTerm Man page Source code
pars Man page Source code
pars.glmerMod Man page Source code
pars.strucGlmer Man page Source code
pars.strucParseFormula Man page Source code
phyloEdge Man page
plot.strucMatrix Man page Source code
point2ind Man page Source code
print.reTrmStruct Man page Source code
print.strucGlmer Man page Source code
print.strucMatrix Man page Source code
print.strucParseFormula Man page Source code
print.summary.strucGlmer Man page Source code
printPars Source code
printReTrm Man page Source code
printReTrm.default Man page Source code
printReTrm.factAnal Man page Source code
printReTrm.nlmeCorStruct Man page Source code
printVC Source code
prt.VC Source code
prt.aictab Source code
prt.call Source code
prt.family Source code
prt.grps Source code
prt.methTit Source code
prt.resids Source code
prt.warn Source code
rStrucMatrix Man page Source code
ranef.reTrmStruct Man page Source code
ranef.strucGlmer Man page Source code
ranefModMat Man page Source code
ranefModMat.reTrmStruct Man page
ranefModMat.strucGlmer Man page Source code
ranefModMat.strucParseFormula Man page Source code
reForm Man page Source code
reIndsPerTrm Man page Source code
reParen Source code
reTrmStruct Man page
reTrmStruct-class Man page
relCovFact Man page Source code
relCovFact.reTrmStruct Man page
relCovFact.strucGlmer Man page Source code
relCovFact.strucParseFormula Man page Source code
removeLatticeWhitespace Source code
reorderPhylo Man page Source code
rep.strucMatrix Man page Source code
resetTransConst Man page Source code
residuals.strucGlmer Man page Source code
response Man page Source code
response.strucGlmer Man page Source code
response.strucParseFormula Man page Source code
safeExtractDiag Source code
scalarMult Man page Source code
scores.factAnal Man page Source code
sem Man page
setInit Man page Source code
setInit.default Man page Source code
setInit.function Man page Source code
setInit.reTrmStruct Man page Source code
setInit.strucMatrix Man page Source code
setInit.strucParseFormula Man page Source code
setLowerDefault Man page Source code
setReTrm Man page Source code
setReTrm.cooccur Man page Source code
setReTrm.default Man page Source code
setReTrm.expDecay Man page Source code
setReTrm.factAnal Man page Source code
setReTrm.flexvar Man page Source code
setReTrm.identity Man page Source code
setReTrm.lme4 Man page Source code
setReTrm.nlmeCorStruct Man page Source code
setReTrm.obslev Man page Source code
setReTrm.phyloEdge Man page Source code
setReTrm.sem Man page Source code
setReTrm.varExp Man page Source code
setReTrm.varIdent Man page Source code
setUpperDefault Man page Source code
showSkeleton Man page Source code
sigma.nlmeCorStruct Man page Source code
sigma.reTrmStruct Man page Source code
sigma.strucGlmer Man page Source code
sigma.strucParseFormula Man page Source code
simAddArgs Man page Source code
simAddArgs.default Man page Source code
simAddArgs.phyloEdge Man page Source code
simAddArgsList Man page Source code
simReTrm Man page Source code
simStruc Source code
simStrucParsedForm Man page Source code
simplifyFacList Man page Source code
simplifyStrucMatrix Man page Source code
simulate.strucGlmer Man page Source code
simulate.strucParseFormula Man page Source code
sort.strucMatrix Man page Source code
sortedBind Man page Source code
splitForm Man page Source code
stanCov Man page Source code
standardSort Man page Source code
strucDims Man page Source code
strucGlmer Man page Source code
strucGlmer-class Man page
strucGlmer.default Man page Source code
strucGlmer.formula Man page Source code
strucGlmer.function Man page Source code
strucGlmer.strucParseFormula Man page Source code
strucGlmerMethTitle Source code
strucMatrix Man page Source code
strucMatrix-class Man page
strucMatrix2dgCMatrix Man page
strucMatrix2dgTMatrix Man page
strucMatrix2dtCMatrix Man page
strucMatrix2dtTMatrix Man page
strucMatrix2gCsparse Source code
strucMatrix2gCsparseMatrix Man page
strucMatrix2gTsparse Source code
strucMatrix2gTsparseMatrix Man page
strucMatrix2sparseMatrix Man page
strucMatrix2tCsparse Source code
strucMatrix2tTsparse Source code
strucMatrixBlank Man page Source code
strucMatrixCol Man page Source code
strucMatrixCompSymm Man page Source code
strucMatrixConstVarChol Man page Source code
strucMatrixCorFactor Man page Source code
strucMatrixCorMatChol Man page Source code
strucMatrixDiag Man page Source code
strucMatrixExpChol Man page Source code
strucMatrixFull Man page Source code
strucMatrixGenFullTri Man page Source code
strucMatrixIdent Man page Source code
strucMatrixInd Man page Source code
strucMatrixOneOffDiag Man page Source code
strucMatrixOnes Man page Source code
strucMatrixRowSubset Man page Source code
strucMatrixSymm Man page Source code
strucMatrixTri Man page Source code
strucMatrixVarWithCovariate Man page Source code
strucMkDevfun Man page Source code
strucOpt Man page Source code
strucParseFormula Man page Source code
subRagByLens Source code
subset.strucMatrix Man page Source code
summary.strucGlmer Man page Source code
t.strucMatrix Man page Source code
tcrossprod,strucMatrix,missing-method Man page
tcrossprod,strucMatrix,strucMatrix-method Man page
tipNodeRelationship Man page Source code
triInds Man page Source code
unaryLangOp Man page Source code
uncoverHiddenSpecials Source code
update.flexvar Man page Source code
update.nlmeCorStruct Man page Source code
update.reTrmStruct Man page Source code
update.strucGlmer Man page Source code
update.strucMatrix Man page Source code
update.strucParseFormula Man page Source code
varExp Man page
varIdent Man page
vcov.strucGlmer Man page Source code
weights.strucGlmer Man page Source code
xscaleComponents Source code
yscaleComponents Source code
stevencarlislewalker/lme4ord documentation built on May 26, 2017, 7:58 p.m.