pars: Parameter retrieval for structured generalized linear mixed...

Description Usage Arguments

Description

Parameter retrieval for structured generalized linear mixed models

Usage

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
pars(object, ...)

## S3 method for class 'strucGlmer'
pars(object, ...)

## S3 method for class 'glmerMod'
pars(object, ...)

## S3 method for class 'strucParseFormula'
pars(object, ...)

covar(object, ...)

## S3 method for class 'strucGlmer'
covar(object, ...)

## S3 method for class 'strucParseFormula'
covar(object, ...)

loads(object, ...)

## Default S3 method:
loads(object, ...)

## S3 method for class 'strucGlmer'
loads(object, ...)

## S3 method for class 'strucParseFormula'
loads(object, ...)

## S3 method for class 'strucGlmer'
fixef(object, ...)

## S3 method for class 'strucParseFormula'
fixef(object, ...)

## S3 method for class 'strucGlmer'
ranef(object, type = c("u", "Lu", "ZLu"), ...)

getStrucGlmerPar(object, type, ...)

parPerTerm(nParPerTrm, pars)

covarPerTerm(object)

loadsPerTerm(object)

nRePerTrm(object)

reIndsPerTrm(object)

getParInds(object, ...)

## S3 method for class 'strucParseFormula'
getParInds(object, ...)

## S3 method for class 'strucGlmer'
getParInds(object, ...)

strucDims(object)

response(object, ...)

## S3 method for class 'strucGlmer'
response(object, ...)

## S3 method for class 'strucParseFormula'
response(object, ...)

fixefModMat(object, ...)

## S3 method for class 'strucParseFormula'
fixefModMat(object, ...)

## S3 method for class 'strucGlmer'
fixefModMat(object, ...)

ranefModMat(object, ...)

## S3 method for class 'strucParseFormula'
ranefModMat(object, transposed = TRUE,
  strucMatrix = FALSE, ...)

## S3 method for class 'reTrmStruct'
ranefModMat(object, transposed = TRUE,
  strucMatrix = FALSE, ...)

## S3 method for class 'strucGlmer'
ranefModMat(object, transposed = TRUE,
  strucMatrix = FALSE, ...)

relCovFact(object, ...)

## S3 method for class 'strucParseFormula'
relCovFact(object, transposed = TRUE,
  strucMatrix = FALSE, ...)

## S3 method for class 'reTrmStruct'
relCovFact(object, transposed = TRUE,
  strucMatrix = FALSE, ...)

## S3 method for class 'strucGlmer'
relCovFact(object, transposed = TRUE,
  strucMatrix = FALSE, ...)

## S3 method for class 'strucGlmer'
nobs(object, ...)

## S3 method for class 'strucParseFormula'
nobs(object, ...)

## S3 method for class 'reTrmStruct'
sigma(object, ...)

## S3 method for class 'nlmeCorStruct'
sigma(object, ...)

## S3 method for class 'strucParseFormula'
sigma(object, ...)

## S3 method for class 'strucGlmer'
sigma(object, ...)

Arguments

object

a strucGlmer fitted model object

...

additional arguments to pass on

type

character string giving the type of parameter (e.g. "fixef", "covar")

nParPerTrm

vector of the number of parameters per term

pars

parameter vector (e.g. result of covar or loads

transposed

Return transposed model matrix?

strucMatrix

Return as strucMatrix or dgCMatrix object?


stevencarlislewalker/lme4ord documentation built on May 30, 2019, 4:43 p.m.