data-raw/generate_package_data.R
In steverozen/PCAWG7: Repository of Data from paper 'The repertoire of Mutational Signatures in Human Cancer'
library(ICAMS)
# This file creates package variable that are now deprecated
# (superseded by variable "exposure")
PCAWG.WGS.SBS.96 <- ICAMS::ReadCatalog("data-raw/WGS_PCAWG.96.csv", region = "genome")
class(PCAWG.WGS.SBS.96) <- "matrix"
usethis::use_data(PCAWG.WGS.SBS.96)
PCAWG.WGS.DBS <- ICAMS::ReadCatalog("data-raw/WGS_PCAWG.dinucs.csv", region = "genome")
class(PCAWG.WGS.DBS) <- "matrix"
usethis::use_data(PCAWG.WGS.DBS)
stopifnot(colnames(PCAWG.WGS.SBS.96) == colnames(PCAWG.WGS.DBS))
steverozen/PCAWG7 documentation built on Feb. 2, 2022, 5:40 a.m.
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library(ICAMS)
# This file creates package variable that are now deprecated
# (superseded by variable "exposure")
PCAWG.WGS.SBS.96 <- ICAMS::ReadCatalog("data-raw/WGS_PCAWG.96.csv", region = "genome")
class(PCAWG.WGS.SBS.96) <- "matrix"
usethis::use_data(PCAWG.WGS.SBS.96)
PCAWG.WGS.DBS <- ICAMS::ReadCatalog("data-raw/WGS_PCAWG.dinucs.csv", region = "genome")
class(PCAWG.WGS.DBS) <- "matrix"
usethis::use_data(PCAWG.WGS.DBS)
stopifnot(colnames(PCAWG.WGS.SBS.96) == colnames(PCAWG.WGS.DBS))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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