KellyKapowski: Compute cortical thickness using the DiReCT algorithm.

In stnava/itkImageR: Examples using Rcpp to interface R and ITK

Description

Diffeomorphic registration-based cortical thickness based on probabilistic segmentation of an image. This is an optimization algorithm.

Usage

KellyKapowski( d=3, s=simg, g=gimg, w=wimg, c="[45,0.0,10]", r=0.5, m=1, o=oimg )

Arguments

imageDimension 2|3|4	Number of dimensions of the input image
inputImage	Input image to operate on
s	segmentation image
g	gray matter probability image
w	white matter probability image
c	convergence params - first controls iterations
r	gradient descent update parameter
m	gradient field smoothing parameter

Value

0 – Success
1 – Failure

Author(s)

Shrinidhi KL, Avants BB

Examples

## Not run: 
KellyKapowski( d=3, s=simg, g=gimg,w=wimg,c=45,r=0.5,m=1,o=oimg )

## End(Not run)

stnava/itkImageR documentation built on May 30, 2019, 7:21 p.m.