maskImage: Mask input image by mask image.

Description Usage Arguments Value Author(s) Examples

Description

Mask an input image by a mask image. If the mask image has multiple labels, it is possible to specify which label(s) to mask at.

Usage

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  maskImage(img.in, img.mask, level=1, binarize = FALSE )

Arguments

img.in

Input image.

img.mask

Mask or label image.

level

Level at which to mask image.

binarize

binarize the output image

Value

An object of type antsImage.

Author(s)

Kandel BM and Avants B.

Examples

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  myimg <- antsImageRead(getANTsRData("ch2"), 3)
  mylab <- antsImageRead(getANTsRData("ch2a"), 3)
  myimg.mask <- maskImage(myimg, mylab, 3)
  plotANTsImage(myimg.mask, axis=3, slices="90x90x90")
  myimg.mask <- maskImage(myimg, mylab, list( 1,  3, 9 ) )

stnava/itkImageR documentation built on May 30, 2019, 7:21 p.m.